Data for Dehalococcoides pangenomic analysis

Hongyu Dang; Timothy E Mattes

doi:10.25820/data.006710

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Data for Dehalococcoides pangenomic analysis

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Data for Dehalococcoides pangenomic analysis

Hongyu Dang and Timothy E Mattes

University of Iowa

11/03/2023

DOI: 10.25820/data.006710

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Abstract

The data set presented here are the formatted files used for the pangenomic analysis of Dehalococcoides with Anvi'o. It includes the Dehalococcoides genomes and assemblies deposited in NCBI by 04/30/2023. The analysis can be used to compare the similarities (average nucleotide identity) among different genomes/assemblies. It can also compare the sequences and identity of a specific gene.

anaerobic bacteria

organohalide respiration

Dehalococcoides

pangenomic analysis

Details

Title: Subtitle: Data for Dehalococcoides pangenomic analysis
Creators: Hongyu Dang (Author) - University of Iowa, IIHR--Hydroscience and Engineering
Timothy E Mattes (Supervisor) - University of Iowa, Civil and Environmental Engineering
Resource Type: Dataset
DOI: 10.25820/data.006710
Publisher: University of Iowa
Grants: Airborne PCBs: Sources, Exposures, Toxicities, Remediation, P42ES013661, National Institutes of Health (United States, Bethesda) - NIH
Language: English
Date published: 11/03/2023
Academic Unit: IIHR--Hydroscience and Engineering; Iowa Superfund Research Program
Record Identifier: 9984462056302771

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Data for Dehalococcoides pangenomic analysis

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