Identification of sedimentary rocks deposited under either fully freshwater or fully marine conditions is relatively straightforward. It is significantly more challenging, however, to identify sedimentary strata deposited under brackish-water conditions, such as where a river enters an ocean basin. This is because the fluvial-tidal transition zone (FTTZ) of coastal rivers is one of the most complex environments on Earth due to the complicated interplay among terrestrial and marine sedimentologic, biologic, and environmental processes occurring there. The first part of this thesis examines ancient sedimentary rocks in central southeastern Iowa deposited in an ancient FTTZ around 300 Ma. Utilizing detailed descriptions of the sedimentary rocks, analysis of fossilized pollen spores, whole rock geochemistry, and statistical analysis, we suggest that the region was dominated by swampy conditions with gradually falling sea level. The second part of this thesis examines sediments in two modern FTTZs in New Brunswick Canada and Georgia, USA. Various elemental ratios have been proposed by previous researchers as potential paleosalinity proxies that may be used to understand salinity conditions at the time of deposition of ancient marine sediments. Geochemical analysis of sediment from the two modern FTTZs was used to test these paleosalinity proxies. Our results suggest that the proposed paleosalinity proxies are not reliable in every depositional system.