The Rho family of guanosine triphosphatases (GTPases) function as binary molecular switches, which play an important role in the regulation of actin cytoskeleton rearrangement and are involved in several critical cellular processes including cell adhesion, division and migration. Rho GTPases are specifically activated by their associated guanine nucleotide exchange factors (RhoGEFs). Dysregulation of RhoGEFs function through mutation or overexpression has been implicated in oncogenic transformation of cells and linked to several kinds of invasive and metastatic forms of cancer. T-cell lymphoma invasion and metastasis 1 (Tiam1) is a multi-domain Dbl family GEF protein and specifically activates Rho GTPase Rac1 through the catalytic Dbl homology and Pleckstrin homology (DH-PH) bi-domain. Previous works have shown that the nucleotide exchange function of the full-length Tiam1 is auto-inhibited and can be activated by N-terminal truncation, phosphorylation and protein-protein interactions. However, the molecular mechanisms of Tiam1 GEF auto-inhibition and activation have not yet been determined. In this study, the N-terminal PH-CC-Ex domain of Tiam1 is shown to directly inhibit the GEF function of the catalytic DH-PH domain in vitro. Using fluorescencebased kinetics experiments, we demonstrate that the auto-inhibition of Tiam1 GEF function occurs by a competitive inhibition model. In this model, the maximum velocity of catalytic activity remains unchanged, but the Michaelis-Menten constant of the auto-inhibited Tiam1 (the PH-PH fragment) on the substrate Rac1 is increased compared to the activated Tiam1 (the catalytic DH-PH domain alone). Through small angle X-ray scattering (SAXS), the structure of auto-inhibited Tiam1 (the PH-PH fragment) is shown to form a closed conformation in which the catalytic DH-PH domain is blocked by the N-terminal PH-CC-Ex domain. Taken together, these findings demonstrate the molecular mechanism of Tiam1 GEF autoinhibition in which the PH-CC-Ex domain of Tiam1 inhibits its GEF function by preventing the substrate Rho GTPase Rac1 from accessing the catalytic DH-PH bi-domain.
Auto-inhibition mechanism of the guanine nucleotide exchange factor Tiam1
Abstract
Details
- Title: Subtitle
- Auto-inhibition mechanism of the guanine nucleotide exchange factor Tiam1
- Creators
- Zhen Xu - University of Iowa
- Contributors
- Ernesto J. Fuentes (Advisor)Charles Brenner (Advisor)Marc S. Wold (Committee Member)Madeline A. Shea (Committee Member)Kris A. Demali (Committee Member)Claudio J. Margulis (Committee Member)
- Resource Type
- Dissertation
- Degree Awarded
- Doctor of Philosophy (PhD), University of Iowa
- Degree in
- Biochemistry
- Date degree season
- Summer 2016
- DOI
- 10.17077/etd.jwep3k4z
- Publisher
- University of Iowa
- Number of pages
- xviii, 160 pages
- Copyright
- Copyright © 2016 Zhen Xu
- Comment
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- Language
- English
- Description illustrations
- color illustrations
- Description bibliographic
- Includes bibliographical references (pages 147-160).
- Public Abstract (ETD)
The Rho family GTPase Rac1 functions as a binary molecular switch in cells. It is specifically activated by T-cell lymphoma invasion and metastasis inducing protein 1 (Tiam1). This molecular switch is essential for the regulation of multiple fundamental cellular processes in cells, including cell adhesion, migration and division. Problems in this switch have been determined to be involved in development of several diseases including cancer and heart disease. The function of Tiam1 has been reported to be auto-inhibited in the full-length protein and requires the activation by upstream cellular signals. Our research is aimed to understand how the function of Tiam1 is controlled. In particular, we are interested in identifying the specific regions of Tiam1 which are responsible for its auto- inhibition.
We detected that the function of Tiam1 was inhibited in the presence of several N-terminal domains, and the PH-CC-Ex domain of Tiam1 was necessary for the negative regulation of Tiam1 function. In addition, our enzyme assays showed that the inhibition of Tiam1 function occurred in a competitive inhibition model. The structure of auto-inhibited Tiam1 in solution was determined to form a closed conformation in which the active site of Tiam1 was blocked by the PH-CC- Ex domain. These results lead us to discover the specific inhibitory regions in Tiam1 and the structural basis for the auto-inhibited Tiam1. It will bring us to better understand the mechanism of Tiam1 inhibition and guide the future study of Tiam1 activation by phosphorylation and protein-protein interactions.
- Academic Unit
- Biochemistry and Molecular Biology
- Record Identifier
- 9983776839502771