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Exploring the intersection of metal homeostasis and oxidative stress response gene regulation in Staphylococcus aureus
Dissertation   Open access

Exploring the intersection of metal homeostasis and oxidative stress response gene regulation in Staphylococcus aureus

Riley McFarlane
University of Iowa
Doctor of Philosophy (PhD), University of Iowa
Spring 2026
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Abstract

Microbes face a variety of changes and stressors in their environment that they must overcome to survive, whether this environment is in the soil or the human host. To surmount these burdens, an arsenal of strategies is encoded by microbes that allow them to successfully grow, and in the case of pathogens, cause infection. The cell must carefully regulate the gene expression of these microbial defenses to most efficiently employ cell resources. This task is necessary as stressors that occur simultaneously often impose incompatible demands on the cell. Two such conflicting threats imposed by the host immune system are metal limitation and oxidative stress. When encountered individually, bacteria circumvent metal restriction in part by expressing metal acquisition systems. Oxidative stress is counteracted by detoxifying enzymes, many of which require a metal cofactor to function, and accordingly metal limitation is a threat to oxidative stress defense. Moreover, as exemplified by the human pathogen Staphylococcus aureus, microbes frequently must overcome both host-imposed metal starvation and oxidative stress. However, how bacteria coordinate a response to conflicting stressors is not well understood. In this way, S. aureus can be utilized to investigate how invaders cope with multiple stressors, allowing them to circumvent the host immune system. This work reveals how S. aureus coordinates a response to the dual threats of metal limitation and oxidative stress by fine-tuning the regulation of a conditionally essential metal-dependent enzyme. When faced with manganese limitation, the small RNA RsaC initiates a manganese-sparing response by suppressing the manganese-utilizing superoxide dismutase SodA. This response protects the cell from manganese starvation by subduing the cellular demand for manganese, thereby allowing for growth and virulence when manganese is scarce. However, this comes at a cost of superoxide detoxification and thus the benefit of RsaC is reduced in the presence of oxidative stress. Therefore, RsaC is caught at the intersection of metal starvation and oxidative stress response, in which it must delicately balance the preservation of essential manganese-dependent processes through manganese-sparing, with the maintenance of adequate oxidative stress defense.
Oxidative Stress Metal limitation RsaC small RNA Staphylococcus aureus Superoxide dismutase

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