Prognostic analysis of lung tumor geometry in tomography scans using convolutional encoder-decoder networks
Abstract
Details
- Title: Subtitle
- Prognostic analysis of lung tumor geometry in tomography scans using convolutional encoder-decoder networks
- Creators
- Yusen He
- Contributors
- Stephen Baek (Advisor)Yong Chen (Committee Member)Xuan Song (Committee Member)Xiaodong Wu (Committee Member)Yusung Kim (Committee Member)Joseph Reinhardt (Committee Member)
- Resource Type
- Dissertation
- Degree Awarded
- Doctor of Philosophy (PhD), University of Iowa
- Degree in
- Industrial Engineering
- Date degree season
- Autumn 2020
- DOI
- 10.17077/etd.005655
- Publisher
- University of Iowa
- Number of pages
- xiii, 116 pages
- Copyright
- Copyright 2020 Yusen He
- Language
- English
- Description illustrations
- color illustrations
- Description bibliographic
- Includes bibliographical references (pages 101-116).
- Public Abstract (ETD)
Non-small-cell lung cancer (NSCLC) represents approximately 80-85 % of lung cancer diagnoses and is the leading cause of cancer-related death worldwide. Recent studies indicate that image-based radiomics features from PET/CT images have predictive power on NSCLC outcomes. As convolutional neural networks (CNN) are rapidly emerging as a new premise for cancer image analysis, it is envisioned that CNN would significantly enhance predictive power compared to traditional hand-crafted radiomics features. In a retrospective study on pre-treatment PET-CT images of 96 NSCLC patients before stereotactic-body radiotherapy (SBRT), we found that the CNN segmentation algorithm (U-Net) trained for tumor segmentation in PET and CT images, contained features having strong correlation with 2- and 5-year overall and disease-specific survivals. The U-Net algorithm has not seen any other clinical information (e.g. survival, age, smoking history, etc.) than the images and the corresponding tumor contours provided by physicians. Furthermore, through visualization of the U-Net, we also found convincing evidence that the regions of metastasis and recurrence appear to match with the regions where the U-Net features identified patterns that predicted higher likelihood of death. We anticipate our findings will be a starting point for more sophisticated non-intrusive patient specific cancer prognosis determination. For example, the deep learned PET/CT features can not only predict survival but also visualize high-risk regions within or adjacent to the primary tumor and hence potentially impact therapeutic outcomes by optimal selection of therapeutic strategy or timely first-line therapy adjustment.
- Academic Unit
- Industrial and Systems Engineering
- Record Identifier
- 9984035990002771