At-admission prediction of mortality and pulmonary embolism in an international cohort of hospitalised patients with COVID-19 using statistical and machine learning methods
Abstract
Details
- Title: Subtitle
- At-admission prediction of mortality and pulmonary embolism in an international cohort of hospitalised patients with COVID-19 using statistical and machine learning methods
- Creators
- Munib Mesinovic - University of OxfordXin Ci WongGiri Shan Rajahram - Queen Elizabeth HospitalBarbara Wanjiru Citarella - University of OxfordKalaiarasu PeariasamyFrank van Someren Greve - Amsterdam University Medical CentersPiero Olliaro - University of OxfordLaura Merson - University of OxfordLei Clifton - University of OxfordChristiana Kartsonaki - University of OxfordSheryl Ann Abdukahil - King Abdulaziz Medical CityNurul Najmee AbdulkadirRyuzo Abe - Chiba University HospitalLaurent Abel - InsermAmal Abrous - InsermLara Absil - Erasmus HospitalAndrew Acker - University of PennsylvaniaShingo AdachiElisabeth Adam - University Hospital FrankfurtEnrico Adriano - University of ParmaDiana Adrião - Centro Hospitalar de Vila Nova de GaiaSaleh Al AgeelShakeel Ahmed - University Hospital KerryMarina Aiello - University of ParmaKate Ainscough - St. Vincent's University HospitalEka Airlangga - Surin HospitalTharwat Aisa - Our Lady of Lourdes HospitalAli Ait Hssain - Hamad General HospitalYounes Ait Tamlihat - Centre Hospitalier Sainte-AnneTakako Akimoto - Teine Keijinkai HospitalErnita AkmalEman Al QasimRazi Alalqam - Beaumont HospitalAngela Alberti - Northwell HealthTala Al-Dabbous - Adan HospitalSenthilkumar Alegesan - University Hospital GalwayCynthia Alegre - Vall d'Hebron Hospital UniversitariMarta Alessi - Azienda Ospedaliera Universitaria Policlinico "Paolo Giaccone" di PalermoBeatrice Alex - University of EdinburghKévin Alexandre - Centre Hospitalier Universitaire de RouenAbdulrahman Al-Fares - Amiri HospitalHuda Alfoudri - Adan HospitalAdam Ali - St Bernard's HospitalImran Ali - Sligo University HospitalKazali Enagnon Alidjnou - Centre Hospitalier Universitaire de LilleJeffrey Aliudin - Hamad General HospitalQabas Alkhafajee - University Hospital KerryClotilde Allavena - Centre Hospitalier Universitaire de NantesNathalie AllouJoão Alves - Hospitais da Universidade de CoimbraJoão Melo Alves - Hospitais da Universidade de CoimbraRita Alves - Hospital Curry CabralJoana Alves Cabrita - Hospital Curry CabralMaria AmaralNur Amira - Hospital Sungai BulohHeidi AmmerlaanPhoebe Ampaw - Ottawa HospitalRoberto Andini - University of Campania "Luigi Vanvitelli"Claire Andréjak - Centre Hospitalier Universitaire Amiens-PicardieAndrea Angheben - Ospedale Sacro Cuore Don CalabriaFrançois Angoulvant - InsermSéverine Ansart - Centre Hospitalier Régional Universitaire de BrestSivanesen Anthonidass - Hospital Kuala LumpurMassimo Antonelli - Agostino Gemelli University PolyclinicCarlos Alexandre Antunes de Brito - Fundação Oswaldo CruzKazi Rubayet Anwar - National Institute of Cardiovascular DiseasesArdiyan ApriyanaYaseen Arabi - National Guard Health AffairsIrene Aragao - Centro Hospitalar do PortoFrancisco Arancibia - Instituto Nacional del TóraxCarolline Araujo - Fundação Oswaldo CruzAntonio Arcadipane - Istituto Mediterraneo per i Trapianti e Terapie ad Alta SpecializzazionePatrick Archambault - Centre intégré de santé et de services sociaux de Chaudière-AppalachesLukas Arenz - Ludwig-Maximilians-Universität MünchenJean-Benoît ArletChristel Arnold-Day - Groote Schuur HospitalLovkesh Arora - University of IowaRakesh Arora - St. Boniface HospitalElise Artaud-Macari - Centre Hospitalier Universitaire de RouenDiptesh AryalMotohiro Asaki - Fujieda Municipal General HospitalAngel Asensio - Hospital Universitario Puerta de Hierro MajadahondaElizabeth Ashley - Lao-Oxford-Mahosot Hospital-Wellcome Trust Research UnitMuhammad Ashraf - Hospital Sungai BulohJean Baptiste AssieAmirul Asyraf - Hospital Sungai BulohAnika Atique - McGill University Health CentreAm Udara Lakshan AttanyakeJohann Auchabie - Centre Hospitalier de LensHugues Aumaitre - Centre Hospitalier de PerpignanAdrien Auvet - Hôpital Européen Georges-PompidouLaurène Azemar - Assistance Publique – Hôpitaux de ParisCecile Azoulay - Assistance Publique – Hôpitaux de ParisBenjamin Bach - University of EdinburghDelphine Bachelet - InsermClaudine Badr - Centre Hospitalier Intercommunal de Villeneuve-Saint-GeorgesNadia BaigJ. Kenneth Baillie - Roslin InstituteJ Kevin Baird - Surin HospitalErica Bak - Rush University Medical Center
- Resource Type
- Journal article
- Publication Details
- Scientific reports, Vol.14(1), 16387
- DOI
- 10.1038/s41598-024-63212-7
- PMID
- 39013928
- PMCID
- PMC11252333
- NLM abbreviation
- Sci Rep
- ISSN
- 2045-2322
- eISSN
- 2045-2322
- Publisher
- Nature Publishing Group
- Grant note
- EPSRC Center for Doctoral Training in Health Data Science: EP/S02428X/1 Rhodes TrustCommonwealth and Development OfficeWellcome: 215091/Z/18/Z, 222410/Z/21/Z, 225288/Z/22/Z, 220757/Z/20/Z Bill & Melinda Gates Foundation: OPP1209135, 0009109 CIHR Coronavirus Rapid Research Funding Opportunity: OV2170359 coordination in Canada by Sunnybrook Research InstituteHealth Research Board of Ireland: 101003589 European Clinical Research Alliance on Infectious Diseases (ECRAID): 965313 Cambridge NIHR Biomedical Research CentreResearch Council of Norway: 312780 Imperial NIHR Biomedical Research Centre: NIHR201385 Innovative Medicines Initiative Joint Undertaking: 115523 COMBACTE European UnionEFPIA companiesStiftungsfonds zur Forderung der Bekampfung der Tuberkulose und anderer Lungenkrankheiten of the City of Vienna: APCOV22BGM Italian Ministry of HealthAustralian Department of Health: 3273191 Gender Equity Strategic Fund at University of QueenslandAustralian Research Council Centre of Excellence for Engineered Quantum Systems: CE170100009 Prince Charles Hospital Foundation, AustraliaInstituto de Salud Carlos III: 303953/2018-7 Firland FoundationINSERM - REACTingFrench Ministry of Health: PHRC n20-0424 foundation Bevordering Onderzoek FranciscusMinistry of Health MalaysiaTWO: P0153_21_N2 Wellcome TrustNational Institute for Health Research (NIHR): CO-CIN-01 Medical Research Council (MRC): MC_PC_19059 NIHR Health Protection Research Unit (HPRU) in Emerging and Zoonotic Infections at University of LiverpoolPublic Health England (PHE): 200907 NIHR HPRU in Respiratory Infections at Imperial College London: 200927 Liverpool Experimental Cancer Medicine Centre: C18616/A25153 NIHR Biomedical Research Centre at Imperial College London: ISBRC-1215-20013 NIHR Clinical Research NetworkWellcome Trust: 225288/Z/22/Z, 220757/Z/20/Z, 222410/Z/21/Z
M. Mesinovic appreciates the support of the EPSRC Center for Doctoral Training in Health Data Science (EP/S02428X/1) and the Rhodes Trust. This work was made possible by the UK Foreign, Commonwealth and Development Office and Wellcome [215091/Z/18/Z, 222410/Z/21/Z, 225288/Z/22/Z and 220757/Z/20/Z]; the Bill & Melinda Gates Foundation [OPP1209135]; the philanthropic support of the donors to the University of Oxford's COVID-19 Research Response Fund (0009109); CIHR Coronavirus Rapid Research Funding Opportunity OV2170359 and the coordination in Canada by Sunnybrook Research Institute; endorsement of the Irish Critical Care-Clinical Trials Group, co-ordination in Ireland by the Irish Critical Care-Clinical Trials Network at University College Dublin and funding by the Health Research Board of Ireland [CTN-2014-12]; the Rapid European COVID-19 Emergency Response research (RECOVER) [H2020 project 101003589] and European Clinical Research Alliance on Infectious Diseases (ECRAID) [965313]; the COVID clinical management team, AIIMS, Rishikesh, India; the COVID-19 Clinical Management team, Manipal Hospital Whitefield, Bengaluru, India; Cambridge NIHR Biomedical Research Centre; the dedication and hard work of the Groote Schuur Hospital Covid ICU Team and supported by the Groote Schuur nursing and University of Cape Town registrar bodies coordinated by the Division of Critical Care at the University of Cape Town; the Liverpool School of Tropical Medicine and the University of Oxford; the dedication and hard work of the Norwegian SARS-CoV-2 study team and the Research Council of Norway grant no 312780, and a philanthropic donation from Vivaldi Invest A/S owned by Jon Stephenson von Tetzchner; Imperial NIHR Biomedical Research Centre; the Comprehensive Local Research Networks (CLRNs) of which PJMO is an NIHR Senior Investigator (NIHR201385); Innovative Medicines Initiative Joint Undertaking under Grant Agreement No. 115523 COMBACTE, resources of which are composed of financial contribution from the European Union's Seventh Framework Programme (FP7/2007- 2013) and EFPIA companies, in-kind contribution; Stiftungsfonds zur Forderung der Bekampfung der Tuberkulose und anderer Lungenkrankheiten of the City of Vienna, Project Number: APCOV22BGM; Italian Ministry of Health "Fondi Ricerca corrente-L1P6" to IRCCS Ospedale Sacro Cuore-Don Calabria; Australian Department of Health grant (3273191); Gender Equity Strategic Fund at University of Queensland, Artificial Intelligence for Pandemics (A14PAN) at University of Queensland, the Australian Research Council Centre of Excellence for Engineered Quantum Systems (EQUS, CE170100009), the Prince Charles Hospital Foundation, Australia; grants from Instituto de Salud Carlos III, Ministerio de Ciencia, Spain; Brazil, National Council for Scientific and Technological Development Scholarship number 303953/2018-7; the Firland Foundation, Shoreline, Washington, USA; the French COVID cohort (NCT04262921) is sponsored by INSERM and is funded by the REACTing (REsearch & ACtion emergING infectious diseases) consortium and by a grant of the French Ministry of Health (PHRC n20-0424); a grant from foundation Bevordering Onderzoek Franciscus; the South Eastern Norway Health Authority and the Research Council of Norway; Institute for Clinical Research (ICR), National Institutes of Health (NIH) supported by the Ministry of Health Malaysia; preparedness work conducted by the Short Period Incidence Study of Severe Acute Respiratory Infection; the U.S. DoD Armed Forces Health Surveillance Division, Global Emerging Infectious Diseases Branch to the U.S Naval Medical Research Unit No. TWO (NAMRU-2) (Work Unit #: P0153_21_N2). These authors would like to thank Vysnova Partners, Inc. for the management of this research project. The Lao-Oxford-Mahosot Hospital-Wellcome Trust Research Unit is funded by the Wellcome Trust. This work uses data provided by patients and collected by the NHS as part of their care and support #DataSavesLives. The data used for this research were obtained from ISARIC4C. We are extremely grateful to the 2648 frontline NHS clinical and research staff and volunteer medical students who collected these data in challenging circumstances; and the generosity of the patients and their families for their individual contributions in these difficult times. The COVID-19 Clinical Information Network (CO-CIN) data was collated by ISARIC4C Investigators. Data and Material provision was supported by grants from: the National Institute for Health Research (NIHR; award CO-CIN-01), the Medical Research Council (MRC; grant MC_PC_19059), and by the NIHR Health Protection Research Unit (HPRU) in Emerging and Zoonotic Infections at University of Liverpool in partnership with Public Health England (PHE), (award 200907), NIHR HPRU in Respiratory Infections at Imperial College London with PHE (award 200927), Liverpool Experimental Cancer Medicine Centre (grant C18616/A25153), NIHR Biomedical Research Centre at Imperial College London (award ISBRC-1215-20013), and NIHR Clinical Research Network providing infrastructure support. We also acknowledge the support of Jeremy J Farrar and Nahoko Shindo.
- Language
- English
- Date published
- 07/16/2024
- Academic Unit
- Anesthesia
- Record Identifier
- 9984757469202771