Journal article
Functional annotation of a full-length mouse cDNA collection
Nature (London), Vol.409(6821), pp.685-690
02/08/2001
DOI: 10.1038/35055500
PMID: 11217851
Abstract
The RIKEN Mouse Gene Encyclopaedia Project, a systematic approach to determining the full coding potential of the mouse genome, involves collection and sequencing of full-length complementary DNAs and physical mapping of the corresponding genes to the mouse genome. We organized an international functional annotation meeting (FANTOM) to annotate the first 21,076 cDNAs to be analysed in this project. Here we describe the first RIKEN clone collection, which is one of the largest described for any organism. Analysis of these cDNAs extends known gene families and identifies new ones.
Details
- Title: Subtitle
- Functional annotation of a full-length mouse cDNA collection
- Creators
- N Sakamoto - RIKEN Brain Science InstituteS Batalov - Genomics Institute of the Novartis Research FoundationM Izawa - Laboratory for Genome Exploration Research Group, RIKEN Genomic Sciences Center (GSC), Yokohama Institute 1-7-22 Suehiro-choS Kohtsuki - NTT Software CorporationK Sato - Tsukuba UniversityC Schönbach - Computational Genomics Team, Bioinformatics Group, RIKEN Genomic Sciences Center (GSC), Yokohama Institute 1-7-22 Suehiro-choT Kasukawa - NTT Software CorporationK Shibata - Laboratory for Genome Exploration Research Group, RIKEN Genomic Sciences Center (GSC), Yokohama Institute 1-7-22 Suehiro-cho CREST, JST, 3-1-1 KoyadaiT OkidoR Baldarelli - Mouse Genome Informatics, The Jackson LaboratoryH Matsuda - Osaka UniversityY Matsuo - Computational Proteomics Team, Bioinformatics Group, RIKEN Genomic Sciences Center (GSC), Yokohama Institute 1-7-22 Suehiro-choM Itoh - Laboratory for Genome Exploration Research Group, RIKEN Genomic Sciences Center (GSC), Yokohama Institute 1-7-22 Suehiro-cho CREST, JST, 3-1-1 KoyadaiC Gissi - Dipartimento di Fisiologia e Biochimica Generali, Universita di Milano Via Celoria, 26R SaitoD. A Hume - Institute for Molecular Bioscience, University of QueenslandT Arakawa - Laboratory for Genome Exploration Research Group, RIKEN Genomic Sciences Center (GSC), Yokohama Institute 1-7-22 Suehiro-choT Gojobori - Center for Information Biology, National Institute of GeneticsH Kochiwa - Laboratory for Bioinformatics, Faculty of Environmental Information, Keio UniversityD Boffelli - Lawrence Berkeley LaboratoryH Kawaji - NTT Software Corporation Osaka UniversityK Aizawa - Laboratory for Genome Exploration Research Group, RIKEN Genomic Sciences Center (GSC), Yokohama Institute 1-7-22 Suehiro-cho CREST, JST, 3-1-1 KoyadaiK.-F Storch - Department of Neurobiology, Harvard Medical SchoolS Fukuda - Laboratory for Genome Exploration Research Group, RIKEN Genomic Sciences Center (GSC), Yokohama Institute 1-7-22 Suehiro-cho CREST, JST, 3-1-1 KoyadaiB Ring - Department of Genetics, Stanford University, Beckman Centre B281K KadotaI Rodriguez - Vertebrate Developmental Neurogenetics, The Rockefeller UniversityA Wynshaw-Boris - University of California San Diego School of Medicine, 9500 Gilman Dr., Medical Teaching Facility, Room 252T Saito - Laboratory for Genome Exploration Research Group, RIKEN Genomic Sciences Center (GSC), Yokohama Institute 1-7-22 Suehiro-choP Kuehl - Department of Molecular & Cell Biology, University of Maryland at BaltimoreL Wagner - National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Building 38A, Room 8N805Y Fukunishi - Laboratory for Genome Exploration Research Group, RIKEN Genomic Sciences Center (GSC), Yokohama Institute 1-7-22 Suehiro-cho CREST, JST, 3-1-1 KoyadaiM. J Brownstein - Laboratory of Genetics, NIMH/NHGRI, National Institutes of Health Building 36, Room 3D06T Washio - Laboratory for Bioinformatics, Faculty of Environmental Information, Keio UniversityY OkazakiW Fleischmann - European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Trust Genome CampusM Ringwald - Mouse Genome Informatics, The Jackson LaboratoryJ Mazzarelli - Computational and Bioinformatics Laboratory, Center for Bioinformatics, University of Pennsylvania, 1313 Blockley HallP Mombaerts - Vertebrate Developmental Neurogenetics, The Rockefeller UniversityH Sasaki - National Cancer Research InstituteL. M Schriml - National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Building 38A, Room 8N805H SuzukiC Bult - Mouse Genome Informatics, The Jackson LaboratoryB King - Mouse Genome Informatics, The Jackson LaboratoryS Kondo - Laboratory for Genome Exploration Research Group, RIKEN Genomic Sciences Center (GSC), Yokohama Institute 1-7-22 Suehiro-choP CarninciL Wilming - Sanger Centre, Wellcome Trust Genome CampusC Weitz - Department of Neurobiology, Harvard Medical SchoolN. H Lee - The Institute for Genomic ResearchT Seya - Osaka Medical Center for CancerK Nishi - Laboratory for Genome Exploration Research Group, RIKEN Genomic Sciences Center (GSC), Yokohama Institute 1-7-22 Suehiro-choG Pesole - Dipartimento di Fisiologia e Biochimica Generali, Universita di Milano Via Celoria, 26M FurunoI Nikaido - Tokai University, Graduate School of Marine Science and TechnologyK Toyo-oka - University of California, San Diego, School of Medicine, Department of Pediatrics, 9500 Gilman Dr., Medical Teaching Facility 253Y HayashizakiJ Quackenbush - The Institute for Genomic ResearchK. H Wang - E17-353, Center for Learning and Memory, Massacusetts Institute of TechnlogyH BonoY Hasegawa - NTT Software CorporationG Barsh - Stanford University School of Medicine, Beckman Centre B271AM Gariboldi - Istituto Tumori MilanoS Gustincich - Department of Neurobiology, Harvard Medical SchoolJ Adachi - Laboratory for Genome Exploration Research Group, RIKEN Genomic Sciences Center (GSC), Yokohama Institute 1-7-22 Suehiro-choY Ishii - Laboratory for Genome Exploration Research Group, RIKEN Genomic Sciences Center (GSC), Yokohama Institute 1-7-22 Suehiro-choJ Mashima - Center for Information Biology, National Institute of GeneticsM Hofmann - LION Bioscience AGM Ashburner - European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Trust Genome CampusY ShibataK YoshidaP Lyons - Department of Medical Genetics, Wellcome Trust Centre for Molecular Mechanisms in Disease, University of Cambridge, Wellcome Trust/MRC building, Addenbrookes HospitalS Lewis - University of California, Berkeley, Department of Molecular & Cell Biology, 142 Life Sciences Addition #3200A Shinagawa - Laboratory for Genome Exploration Research Group, RIKEN Genomic Sciences Center (GSC), Yokohama Institute 1-7-22 Suehiro-choD Hill - Mouse Genome Informatics, The Jackson LaboratoryJ Kawai - Laboratory for Genome Exploration Research Group, RIKEN Genomic Sciences Center (GSC), Yokohama Institute 1-7-22 Suehiro-cho CREST, JST, 3-1-1 KoyadaiM Tomita - Laboratory for Bioinformatics, Faculty of Environmental Information, Keio UniversityL Marchionni - LNCIB c/o AREA Science ParkH Kiyosawa - Laboratory for Genome Exploration Research Group, RIKEN Genomic Sciences Center (GSC), Yokohama Institute 1-7-22 Suehiro-choF Staubli - LION Bioscience AGR Suzuki - Laboratory for Bioinformatics, Faculty of Environmental Information, Keio UniversityN Bojunga - LION Bioscience AGP Nordone - University at Buffalo/Roswell Park Cancer InstituteC Fletcher - Genomics Institute of the Novartis Research FoundationC Whittaker - Massachusetts Institute of Technology, MIT CCRM Yoshino - Laboratory for Genome Exploration Research Group, RIKEN Genomic Sciences Center (GSC), Yokohama Institute 1-7-22 Suehiro-choH Konno - Laboratory for Genome Exploration Research Group, RIKEN Genomic Sciences Center (GSC), Yokohama Institute 1-7-22 Suehiro-cho CREST, JST, 3-1-1 KoyadaiK SakaiM. F de Bonaldo - Department of Pediatrics, The University of IowaA Hara - Laboratory for Genome Exploration Research Group, RIKEN Genomic Sciences Center (GSC), Yokohama Institute 1-7-22 Suehiro-choT Casavant - The Coordinated Laboratory for Computational Genomics, University of Iowa Iowa CityH AonoM Fujita - Graduate School of Medicine, The University of TokyoI Yamanaka - Laboratory for Genome Exploration Research Group, RIKEN Genomic Sciences Center (GSC), Yokohama Institute 1-7-22 Suehiro-choJ Blake - Jackson LaboratoryT Gaasterland - The Rockefeller UniversityM Kamiya
- Resource Type
- Journal article
- Publication Details
- Nature (London), Vol.409(6821), pp.685-690
- DOI
- 10.1038/35055500
- PMID
- 11217851
- NLM abbreviation
- Nature
- ISSN
- 0028-0836
- eISSN
- 1476-4687
- Language
- English
- Date published
- 02/08/2001
- Academic Unit
- Roy J. Carver Department of Biomedical Engineering; Electrical and Computer Engineering
- Record Identifier
- 9984064580102771
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