Journal article
Time-dependent transcriptome profile of genes involved in triacylglycerol (TAG) and polyunsaturated fatty acid synthesis in Nannochloropsis gaditana during nitrogen starvation
Journal of applied phycology, Vol.32(2), pp.1153-1164
04/01/2020
DOI: 10.1007/s10811-019-02021-2
Abstract
In this research, the gene expression of genes involved in lipid metabolism of the eustigmatophyte alga
Nannochloropsis gaditana
was measured by transcriptomic data. This microalga can be used as a source of triacylglycerol (TAG) and the omega-3 fatty acid eicosapentaenoic acid (EPA). Insight in TAG and EPA production and regulation are needed to improve their productivity. Nitrogen starvation induces TAG accumulation in
N. gaditana
. Previous research showed that during nitrogen starvation
,
EPA was translocated from the polar lipids to TAG and de novo synthesized in
N. gaditana
. Therefore, the expression levels of genes involved in fatty acid translocation and de novo TAG synthesis were measured. Furthermore, the genes involved in de novo EPA synthesis such as elongases and desaturases were studied. The expression levels were measured during the first hours of nitrogen starvation and the subsequent period of 14 days. One phospholipid:diacylglycerol acyltransferase (PDAT) gene involved in translocation of fatty acids from membrane lipids to TAG was upregulated. In addition, several lipases were upregulated, suggesting that these enzymes might be responsible for the translocation of EPA to TAG. Most desaturases and elongases involved in de novo EPA synthesis were downregulated during nitrogen starvation, except for Δ9 desaturase which was upregulated. This upregulation correlates with the increase in oleic acid. Due to the presence of many hypothetical genes, improvement in annotation is needed to increase our understanding of these pathways and their regulation.
Details
- Title: Subtitle
- Time-dependent transcriptome profile of genes involved in triacylglycerol (TAG) and polyunsaturated fatty acid synthesis in Nannochloropsis gaditana during nitrogen starvation
- Creators
- Jorijn H. Janssen - Wageningen University & ResearchJacco Spoelder - Wageningen University & ResearchJasper J. Koehorst - Wageningen University & ResearchPeter J. Schaap - Wageningen University & ResearchRené H. Wijffels - Nord UniversityMaria J. Barbosa - Bioprocess Engineering, AlgaePARC, Wageningen University and Research
- Resource Type
- Journal article
- Publication Details
- Journal of applied phycology, Vol.32(2), pp.1153-1164
- DOI
- 10.1007/s10811-019-02021-2
- ISSN
- 0921-8971
- eISSN
- 1573-5176
- Publisher
- Springer Netherlands
- Grant note
- 613588 / FP7 Ideas: European Research Council (http://dx.doi.org/10.13039/100011199)
- Language
- English
- Date published
- 04/01/2020
- Academic Unit
- International Programs; Spanish and Portuguese
- Record Identifier
- 9984398008302771
Metrics
13 Record Views