Towards fair decentralized benchmarking of healthcare AI algorithms with the Federated Tumor Segmentation (FeTS) challenge
Abstract
Details
- Title: Subtitle
- Towards fair decentralized benchmarking of healthcare AI algorithms with the Federated Tumor Segmentation (FeTS) challenge
- Creators
- Maximilian ZenkUjjwal BaidSarthak PatiAkis LinardosBrandon EdwardsMicah ShellerPatrick FoleyAlejandro AristizabalDavid ZimmererAlexey GruzdevJason MartinRussell T ShinoharaAnnika ReinkeFabian IsenseeSanthosh ParampottupadamKaushal ParekhRalf FlocaHasan KassemBhakti BahetiSiddhesh ThakurVerena ChungKaisar KushibarKarim LekadirMeirui JiangYoutan YinHongzheng YangQuande LiuCheng ChenQi DouPheng-Ann HengXiaofan ZhangShaoting ZhangMuhammad Irfan KhanMohammad Ayyaz AzeemMojtaba JafaritadiEsa AlhoniemiElina KontioSuleiman A KhanLeon MaechlerIvan EzhovFlorian KoflerSuprosanna ShitJohannes C PaetzoldTimo LoehrBenedikt WiestlerHimashi PeirisKamlesh PawarShenjun ZhongZhaolin ChenMunawar HayatGary EganMehrtash HarandiEce Isik PolatGorkem PolatAltan KocyigitAlptekin TemizelAnup TuladharLakshay TyagiRaissa SouzaNils D ForkertPauline MouchesMatthias WilmsVishruth ShambhatAkansh MauryaShubham Subhas DanannavarRohit KallaVikas Kumar AnandGanapathy KrishnamurthiSahil NalawadeChandan GaneshBen WagnerDivya ReddyYudhajit DasFang F YuBaowei FeiAnanth J MadhuranthakamJoseph MaldjianGaurav SinghJianxun RenWei Zhang - Changping LaboratoryNing AnQingyu HuYoujia ZhangYing ZhouVasilis SiomosGiacomo TarroniJonathan Passerrat-PalmbachAmbrish RawatGiulio ZizzoSwanand Ravindra KadheJonathan P EpperleinStefano BraghinYuan WangRenuga KanagaveluQingsong WeiYechao YangYong LiuKrzysztof KotowskiSzymon AdamskiBartosz MachuraWojciech MalaraLukasz ZarudzkiJakub NalepaYaying ShiHongjian GaoSalman AvestimehrYonghong YanAgus S AkbarEkaterina KondratevaHua Yang - Fujian Normal UniversityZhaopei LiHung-Yu WuJohannes RothCamillo SaueressigAlexandre MilesiQuoc D NguyenNathan J GruenhagenTsung-Ming HuangJun MaHar Shwinder H SinghNai-Yu PanDingwen ZhangRamy A ZeineldinMichal FutregaYading YuanGian Marco ConteXue FengQuan D PhamYong XiaZhifan JiangHuan Minh LuuMariia DobkoAlexandre CarreBair TuchinovHassan Mohy-ud-DinSaruar AlamAnup SinghNameeta ShahWeichung WangChiharu SakoMichel BilelloSatyam GhodasaraSuyash MohanChristos DavatzikosEvan CalabreseJeffrey RudieJavier Villanueva-MeyerSoonmee ChaChristopher HessJohn MonganMadhura IngalhalikarManali JadhavUmang PandeyJitender SainiRaymond Y HuangKen ChangMinh-Son ToSargam BhardwajChee ChongMarc AgzarianMichal KozubekFilip LuxJan MichalekPetr MatulaMilos KerkovskyTereza KoprivovaMarek DostalVaclav VybihalMarco C PinhoJames HolcombMarie MetzRajan JainMatthew D LeeYvonne W LuiPallavi TiwariRuchika VermaRohan BarejaIpsa YadavJonathan ChenNeeraj KumarYuriy GusevKrithika BhuvaneshwarAnousheh SayahCamelia BencheqrounAnas BeloualiSubha MadhavanRivka R ColenAikaterini KotrotsouPhilipp VollmuthGianluca BrugnaraChandrakanth J PreethaFelix SahmMartin BendszusWolfgang WickAbhishek MahajanCarmen BalanaJaume CapelladesJosep PuigYoon Seong ChoiSeung-Koo LeeJong Hee ChangSung Soo AhnHassan F ShaykhAlejandro Herrera-TrujilloMaria TrujilloWilliam EscobarAna AbelloJose BernalJhon GomezPamela LamontagneDaniel S MarcusMikhail MilchenkoArash NazeriBennett LandmanKarthik RamadassKaiwen XuSilky ChotaiLola B ChamblessAkshitkumar MistryReid C ThompsonAshok SrinivasanJ. Rajiv BapurajArvind RaoNicholas WangOta YoshiakiToshio MoritaniSevcan TurkJoonsang LeeSnehal PrabhudesaiJohn GarrettMatthew LarsonRobert JerajHongwei LiTobias WeissMichael WellerAndrea BinkBertrand PouymayouSonam SharmaTzu-Chi TsengSaba AdabiAlexandre Xavier FalcãoSamuel B MartinsBernardo C. A TeixeiraFlavia SprengerDavid MenottiDiego R LucioSimone P NiclouOlivier KeunenAnn-Christin HauEnrique PelaezHeydy Franco-MaldonadoFrancis LoayzaSebastian QuevedoRichard MckinleyJohannes SlotboomPiotr RadojewskiRaphael MeierRoland WiestJohannes TrenklerJosef PichlerGeorg NeckerAndreas HaunschmidtStephan MeckelPamela GuevaraEsteban TorcheCristobal MendozaFranco VeraElvis RiosEduardo LopezSergio A VelastinJoseph ChoiStephen BaekYusung KimHeba IsmaelBryan AllenJohn M BuattiPeter ZampakisVasileios PanagiotopoulosPanagiotis TsiganosSotiris AlexiouIlias HaliassosEvangelia I ZacharakiKonstantinos MoustakasChristina KalogeropoulouDimitrios M KardamakisBing LuoLaila M PoissonNing WenMartin VallieresMahdi Ait Lhaj LoutfiDavid FortinMartin LepageFanny MoronJacob MandelGaurav ShuklaSpencer LiemGregory S AlexandreJoseph LombardoJoshua D PalmerAdam E FlandersAdam P DickerGodwin OgboleDotun OyekunleOlubunmi Odafe-OyibothaBabatunde OsobuMustapha Shu'aibu HikimaMayowa SoneyeFarouk DakoAdeleye DorcasDerrick MurciaEric FuRourke HaasJohn A ThompsonDavid Ryan OrmondStuart CurrieKavi FataniaRussell FroodAmber L SimpsonJacob J PeoplesRicky HuDanielle CutlerFabio Y MoraesAnh TranMohammad HamghalamMichael A BossJames GimpelDeepak Kattil VeettilKendall SchmidtLisa CiminoCynthia PriceBrian BialeckiSailaja MarellaCharles ApgarAndras JakabMarc-Andre WeberErrol ColakJens KleesiekJohn B FreymannJustin S KirbyLena Maier-HeinJake AlbrechtPeter MattsonAlexandros KarargyrisPrashant ShahBjoern MenzeKlaus Maier-HeinSpyridon Bakas
- Resource Type
- Journal article
- Publication Details
- Nature communications, Vol.16(1), 6274
- DOI
- 10.1038/s41467-025-60466-1
- PMID
- 40628696
- PMCID
- PMC12238412
- NLM abbreviation
- Nat Commun
- ISSN
- 2041-1723
- eISSN
- 2041-1723
- Publisher
- Springer Nature
- Grant note
- Helmholtz Association (HA) within the project "Trustworthy Federated Data Analytics" (TFDA): ZT-I-OO1 4 National Institutes of Health (NIH): NCI:U01CA242871, NCI:U24CA279629 Juan de la Cierva fellowship: FJC2021-047659-I Hong Kong Research Grants Council: T45- 401/22-N Business Finland: 33961/31/2020 CSC-Puhti supercomputerCanadian Institutes of Health Research (CIHR Project): 462169 Silesian University of Technology funds through the Excellence Initiative-Research University program: 02/080/SDU/10-21-01 Silesian University of TechnologyNIH/NIBIB: R21EB030209 NIH/NCATS, a research grant from Varian Medical Systems (Palo Alto, CA, USA): UL1TR001433 Herbert and Florence Irving/the Irving TrustNational Cancer Institute: UG3 CA236536, U24CA248265 Higher Education Commission of Pakistan as part of the National Center for Big Data and Cloud ComputingClinical and Translational Imaging Lab at LUMSMinistry of Health of the Czech Republic: NU21-08-00359, FNBr-65269705 Ministry of Education, Youth and Sports of the Czech Republic: LM2023050 MH CZ - DRO (FNBr): 65269705 CCSG Grant: NCI P30 CA51008 Deutsche Forschungsgemeinschaft (DFG, German Research Foundation): 404521405, SFB 1389, KI 2410/1-1 divided by MA 6340/18-1 NSF: 2040462 National Institutes of Health: R37CA214955-01A1, R01CA233888 CNPq: 304711/2023-3 ANID-Basal proyects: AFB240002, FB210017 NSF Convergence Accelerator - Track D: ImagiQ: Asynchronous and Decentralized Federated Learning for Medical Imaging: 2040532, R21CA270742 Canada CIFAR AI Chairs ProgramLeeds Hospitals Charity: 9R01/1403 Cancer Research UK: C19942/A28832 Wellcome award: 203914/Z/16/Z CRUK: RCCCTF-Oct22/100002 Wellcome Trust: 203914/Z/16/Z
We would like to thank Manuel Wiesenfarth and Paul F. Jaeger (DKFZ) for helpful discussions. Research reported in this publication was partly funded by the Helmholtz Association (HA) within the project "Trustworthy Federated Data Analytics" (TFDA) (funding number ZT-I-OO1 4), and partly by the National Institutes of Health (NIH), under award numbers NCI:U01CA242871 (PI: S.Bakas) and NCI:U24CA279629 (PI: S.Bakas). K. Kushibar holds the Juan de la Cierva fellowship with a reference number FJC2021-047659-I. This work was supported in part by Hong Kong Research Grants Council Project No. T45- 401/22-N. Team HT-TUAS was partly funded by Business Finland under Grant 33961/31/2020. They also acknowledges the CSC-Puhti super-computer for their support and computational resources during FeTS 2021 and 2022. N. D. Forkert was supported by the Canadian Institutes of Health Research (CIHR Project Grant 462169). Jakub Nalepa was supported by the Silesian University of Technology funds through the Excellence Initiative-Research University program (Grant 02/080/SDU/10-21-01), and by the Silesian University of Technology funds through the grant for maintaining and developing research potential. Research reported in this publication was partly funded by R21EB030209, NIH/NIBIB (PI: Y. Yuan), UL1TR001433, NIH/NCATS, a research grant from Varian Medical Systems (Palo Alto, CA, USA) (PI: Y. Yuan). Y. Yuan also acknowledges the generous support of Herbert and Florence Irving/the Irving Trust. Z. Jiang was supported by National Cancer Institute (UG3 CA236536). H. Mohy-ud-Din was supported by a grant from the Higher Education Commission of Pakistan as part of the National Center for Big Data and Cloud Computing and the Clinical and Translational Imaging Lab at LUMS. M. Kozubek was supported by the Ministry of Health of the Czech Republic (grant NU21-08-00359 and conceptual development of research organization FNBr-65269705) and Ministry of Education, Youth and Sports of the Czech Republic (Project LM2023050). Vaclav Vybihal was supported by MH CZ - DRO (FNBr, 65269705). Y. Gusev was supported by CCSG Grant number: NCI P30 CA51008. P. Vollmuth was supported by Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) - Project-ID 404521405, SFB 1389 - UNITE Glioblastoma, Work Package C02, and Priority Programme 2177 "Radiomics: Next Generation of Biomedical Imaging" (KI 2410/1-1 divided by MA 6340/18-1). B. Landman was supported by NSF 2040462. A. Rao was supported by the NIH (R37CA214955-01A1). A. Falc & atilde;o was supported by CNPq 304711/2023-3. P. Guevara was supported by the ANID-Basal proyects AFB240002 (AC3E) and FB210017 (CENIA). Research reported in this publication was partly funded by the NSF Convergence Accelerator - Track D: ImagiQ: Asynchronous and Decentralized Federated Learning for Medical Imaging, Grant Number: 2040532, and R21CA270742 (Period of Funding: 09/15/20 - 05/31/21). Martin Vallieres acknowledges funding from the Canada CIFAR AI Chairs Program. Stuart Currie receives salary support from a Leeds Hospitals Charity (9R01/1403) and Cancer Research UK (C19942/A28832) grants. Kavi Fatania is a 4ward North Clinical PhD fellow funded by Wellcome award (203914/Z/16/Z). Russell Frood is a Clinical Trials Fellow funded by CRUK (RCCCTF-Oct22/100002). This work was funded in part by National Institutes of Health R01CA233888 and the grant NCI:U24CA248265. The content of this publication is solely the responsibility of the authors and does not represent the official views of the HA, or the NIH. U.Baid, S.Pati, and S.r Bakas conducted part of the work reported in this manuscript at their current affiliations, as well as while they were affiliated with the Center for Artificial Intelligence and Data Science for Integrated Diagnostics (AI2D) and the Center for Biomedical Image Computing and Analytics (CBICA) at the University of Pennsylvania, Philadelphia, PA, USA.
- Language
- English
- Date published
- 07/01/2025
- Academic Unit
- Radiation Oncology; Neurosurgery; Otolaryngology
- Record Identifier
- 9984927209202771