Output list
Conference poster
Multiscale Imaging-Based Cluster Analysis of a Cohort of Current Smokers
Date presented 03/22/2017
Annual Multiscale Modeling (MSM) Consortium Meeting, 03/22/2017–03/24/2017, Bethesda, Maryland
Classification of patients with chronic obstructive pulmonary disease (COPD) is usually based on the severity of airflow limitation, e.g. pre- and post- bronchodilator FEV1, which may not reflect the phenotypic heterogeneity nature of the disease. Recently, we have developed a multiscale-imaging based cluster analysis (MICA) and applied it to analyze 248 asthmatics from Severe Asthma Research Program (SARP). MICA yielded four stable imaging clusters which exhibit strong associations with clinical characteristics (1). In this study, we further applied MICA to a cohort of current smokers from the SubPopulations and InteRmediate Outcome Measures in COPD Study (SPIROMICS). We obtained four statistically stable clusters with distinct imaging-based structural and functional alterations. We further demonstrated that these imaging clusters exhibit significant associations with distinct clinical phenotypes used for diagnosis of COPD. Our MICA provides a link between individual and population scales.
Conference poster
Toward Imaging-Based Asthma Sub-Grouping: Cluster Analysis with Multiscale Structural and Functional Variables in Asthma Populations
Date presented 09/08/2015
Annual Multiscale Modeling (MSM) Consortium Meeting, 09/08/2015–09/09/2015, Bethesda, Maryland
Conference poster
Normal and Cystic Fibrosis Airway Epithelial Cell Models for the Study of Periciliary Liquid Regulation in Response to Mechanical Forces
Date presented 05/17/2015
American journal of respiratory and critical care medicine
Annual American Thoracic Society Meeting, 05/15/2015–05/20/2015, Denver, Colorado
Conference poster
Accelerating Multi-level Deformable Image Registration Methods for Lung Images with GPU Computing
Date presented 03/16/2015
GPU Technology Conference, 03/16/2015–03/20/2015, San Jose, California
Conference poster
Improving Performance of Multi-Level Nonrigid Registration of Two Ct-Based Lung Images With Use of GPU Computing
Date presented 03/15/2015
SIAM Conference on Computational Science and Engineering, 03/14/2015–03/18/2015, Salt Lake City, Utah
Conference poster
Toward Population-based Analysis: Improved CT-based Measures of Air-trapping and Airway Dimension in a Multi-center Asthmatic Study
Date presented 09/03/2014
Annual Multiscale Modeling (MSM) Consortium Meeting, 09/03/2014–09/04/2014, Bethesda, Maryland
Rationale: Quantitative computed tomography (CT)-based images of total lung capacity (TLC) and functional residual capacity (FRC) have been used to analyze airway dimension and air-trapping (residual air), respectively. However, existing studies of luminal area (LA) and wall thickness (WT) were inconclusive among different studies, and the existing density-threshold air-trapping method was problematic due to differences in multi-center scanners and breath-hold coaching methods. This study
introduces a fraction-threshold air-trapping method that adjusts for inter-site and inter-subject variations, and further investigates the alterations of LA and WT in asthmatic populations along with the improved normalization. This is a critical step toward population-based analysis that allows utilization of CT data collected by multiple centers.
Methods: CT images of 50 healthy, 42 non-severe asthmatic and 52 severe asthmatic subjects at TLC and FRC were employed. The data were acquired via two centers of NIH-sponsored severe asthma research program (SARP) at the University of Pittsburgh and the Washington University in Saint Louis, and a NIH bioengineering research partnership at the University of Iowa. A new fraction-based approach with the Hounsfield Unit of air corrected by tracheal density was applied to quantify air-trapping percentage (AirT%), and a new slope-based clustering method was employed to control lung volume variation at FRC. Besides, pulmonary function test (PFT)-based TLC lung volume was used to improve normalization of dimensional variables, such as LA and WT, and subsequently control inter-subject variability.
Results: The fraction-based measure of air-trapping collapses data of healthy subjects into a single regression line regardless of scanner variation, and differentiates the regression of severe asthmatics from that of healthy subjects and non-severe asthmatics. Consequently, as compared with traditional constant-value-based clustering, the new slope-based clustering method reduces misclassification rate of healthy subjects to air-trapped severe asthmatics from 50% to 22%. The bulk WT increases in both non-severe and severe asthmatics. The LA and luminal circularity are significantly reduced in severe asthmatics, being different from non-severe asthmatics. Furthermore, the air-trapped regions detected in asthmatics are significantly correlated with the reduced hydraulic diameter caused by airway constriction and non-circularity.
Conclusions: The fraction-based measure of air-trapping enables differentiation of severe asthma from non-severe asthma and healthy population. We speculate that regional alterations of airways shall be associated with abnormal lung function, i.e. air-trapping.
Conference poster
Date presented 09/2014
Multiscale Modeling (MSM) Consortium, 09/03/2014–09/04/2014, Bethesda, Maryland
Conference poster
Date presented 05/19/2014
Annual American Thoracic Society Meeting, 05/16/2014–05/21/2014, San Diego, California
Conference poster
A Numerical Study Of Correlation Between Aerosol Deposition And Airway Skeleton Of Severe Asthmatics
Published 2014
AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE, 189, A6281
Annual American Thoracic Society Meeting, 05/16/2014–05/21/2014, San Diego, California
Conference poster
3d Simulation Of Heat And Water Vapor Transfer In CT-Based Human Airway Models
Published 2014
AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE, 189, A6280
American Thoracic Society Meeting, 05/16/2014–05/21/2014, San Diego, California